Oberwolfach References on Mathematical Software

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CoCoA

CoCoA is a system for Computations in Commutative Algebra. It is able to perform simple and sophisticated operations on multivaraiate polynomials and on various data related to them (ideals, modules, matrices, rational functions). For example, it can readily compute Grobner bases, syzygies and minimal free resolution, intersection, division, the radical of an ideal, the ideal of zero-dimensional schemes, Poincare' series and Hilbert functions, factorization of polynomials, toric ideals. The capabilities of CoCoA and the flexibility of its use are further enhanced by the dedicated high-level programming language. For convenience, the system offers a textual interface, an Emacs mode, and a graphical user interface common to most platforms.

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Fermat

Fermat is a super calculator - computer algebra system, in which the basic items being computed can be rational numbers, modular numbers, elements of finite fields, multivariable polynomials, multivariable rational functions, or multivariable polynomials modulo other polynomials. Fermat is available for Mac OS, Windows, Unix, and Linux. It is shareware. The basic “ground ring" F is the field of rational numbers. One may choose to work modulo a specified integer n, thereby changing the ground ring F from Q to Z/n. On top of this may be attached any number of unevaluated variables t_1, t_2, .. t_n., thereby creating the polynomial ring F[t_1, t_2, .. t_n] and its quotient field, the rational functions. Further, polynomials p, q, .. can be chosen to mod out with, creating the quotient ring F(t_1, t_2, ..)/[p, q, ...]. It is possible to allow Laurent polynomials. Once the computational ring is established in this way, all computations are of elements of this ring.

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GELDA

GELDA is a Fortran77 software package for the numerical integration of general linear differential-algebraic equations (DAE) with variable coefficients of arbitrary index. The implementation of GELDA is based on the construction of the discretization scheme, which first determines all the local invariants and then transforms the linear DAE into an equivalent strangeness-free DAE with the same solution set. The resulting strangeness-free system is allowed to have nonuniqueness in the solution set or inconsistency in the initial values or inhomogeneities. In the case that the DAE is found to be uniquely solvable, GELDA is able to compute a consistent initial value and apply the well-known integration schemes for DAEs. In GELDA the BDF methods and Runge-Kutta schemes are implemented.

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HiFlow³

HiFlow³ is a multi-purpose finite element software providing powerful tools for efficient and accurate solution of a wide range of problems modeled by partial differential equations. Based on object-oriented concepts and the full capabilities of C++ the HiFlow³ project follows a modular and generic approach for building efficient parallel numerical solvers. It provides highly capable modules dealing with the mesh setup, finite element spaces, degrees of freedom, linear algebra routines, numerical solvers, and output data for visualization. Parallelism – as the basis for high performance simulations on modern computing systems – is introduced on two levels: coarse-grained parallelism by means of distributed grids and distributed data structures, and fine-grained parallelism by means of platform-optimized linear algebra back-ends.

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ISAAC

ISAAC (Integrated Solution Algorithm for Arbitrary Configurations) is a compressible Euler/Navier-Stokes computational fluid dynamics code. ISAAC includes the capability of calculating the Euler equations for inviscid flow or the Navier-Stokes equations for viscous flows. ISAAC uses a domain decomposition structure to accomodate complex physical configurations. ISAAC can calculate either steady-state or time dependent flow. ISAAC was designed to test turbulence models. Various two equation turbulence models, explicit algebraic Reynolds stress models, and full differential Reynolds stress models are implemented in ISAAC. Several test cases are documented in the User's Guide.

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LinBox

LinBox is a C++ template library for exact, high-performance linear algebra computation with dense, sparse, and structured matrices over the integers and over finite fields. LinBox has the following top-level functions: solve linear system, matrix rank, determinant, minimal polynomial, characteristic polynomial, Smith normal form and trace. A good collection of finite field and ring implementations is provided, for use with numerous black box matrix storage schemes.

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polymake

polymake is an object-oriented system for experimental discrete mathematics. The typical working cycle of a polymake user starts with the construction of an object of interest, auch as a convex polytope, a finite simplicial complex, a graph, etc. It is then possible to ask the system for some of the object's properties or for some form of visualization. Further steps might include more elaborate constructions based on previously defined objects. Each class of polymake objects comes with a set of rules which describe how a new property of an object can be derived from previously known ones. It is a key feature that the user can extend or modify the set of rules, add further properties or even new classes of objects (with entirely new rule bases). The functions provided include: several convex hull algorithms, face lattices of convex polytopes, Voronoi diagrams and Delaunay decompositions (in arbitrary dimensions), simplicial homology (with integer coefficients), simplicial cup and cap products, intersection forms of triangulated 4-manifolds. Several forms of (interactive) visualization via interfaces to Geomview, JavaView and other programs.

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rbMIT

The rbMIT © MIT software package implements in Matlab® all the general reduced basis algorithms. The rbMIT © MIT software package is intended to serve both (as Matlab® source) "Developers" — numerical analysts and computational tool-builders — who wish to further develop the methodology, and (as Matlab® "executables") "Users" — computational engineers and educators — who wish to rapidly apply the methodology to new applications. The rbMIT software package was awarded with the Springer Computational Science and Engineering Prize in 2009.

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Sage

SAGE is a framework for number theory, algebra, and geometry computation. It is open source and freely available under the terms of the GNU General Public License (GPL). SAGE is a Python library with a customized interpreter. It is written in Python, C++, and C (via Pyrex). Python (http://www.python.org) is an open source object-oriented interpreted language, with a large number of libraries, e.g., for numerical analysis, which are available to users of SAGE. Python can also be accessed in library mode from C/C++ programs. SAGE provides an interface to several important open source libraries, including Cremona’s MWRANK library for computing with elliptic curves, the PARI library (pari.math.u-bordeaux.fr) for number theory, Shoup’s number theory library NTL (http://www.shoup.net/ntl/), SINGULAR (http://www.singular.uni-kl.de) for commutative algebra, GAP (http://www.gap-system.org) for group theory and combinatorics, and maxima (http://maxima.sourceforge.net) for symbolic computation and calculus.

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